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A Late Quaternary record of highstand shedding from an isolated carbonate platform (Juan de Nova, southern Indian Ocean) ArchiMer
Counts, John; Jorry, Stephan; Vazquez Riveiros, Natalia; Jouet, Gwenael; Giraudeau, Jacques; Cheron, Sandrine; Boissier, Audrey; Miramontes, Elda.
A 27 m core collected on the seafloor near Juan de Nova island at 1909 m depth in the SW Indian Ocean preserves a high‐resolution record of carbonate sediment export to the deep sea over the past 1 Myr. Core chronology was established using calcareous nannofossil biostratigraphy and benthic foraminiferal δ18O. Throughout the core, preserved highstand intervals (MIS 1, 5, 7, 9, 11, 13, 15, 23 and 25) are marked by an increase in the aragonite content within the sediment. Aragonite is likely sourced from the nearby Juan de Nova carbonate platform ~10 km to the south, and is interpreted to result from flooding of the platform top. Platform inundation allows carbonate muds to be winnowed from their original shallow‐water environment of deposition, suspended in...
Tipo: Text Palavras-chave: Aragonite; Atoll; MIS 11; Mozambique Channel; Sea-level change.
Ano: 2019 URL: https://archimer.ifremer.fr/doc/00474/58553/61108.pdf
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A leguminosa Cratylia argentea e a construção de uma rede de pesquisa participativa. Infoteca-e
MATRANGOLO, W. J. R.; SILVA, I. F. H. da; ALMEIDA, L. G. de; MALTA, P. da C. C.; CRUZ, S. C. B. da; GOMES, S. X..
A maioria das plantas cultivadas no Brasil é exótica e vem sendo adaptada às nossas condições edafoclimáticas, sendo parcos os investimentos feitos à flora nativa. A biodiversidade associada aos processos produtivos agropecuários teve papel fundamental na construção histórica da agricultura e por certo será imprescindível para a renovação de processos que buscam minimizar os impactos negativos gerados pelo atual modelo de agricultura industrial. O texto que segue discorre sobre a importância de aprofundamento desse diálogo, e apresenta a leguminosa nativa Cratylia argentea (Desvaux) O. Kuntze e suas relações com insetos benéficos como instrumento em potencial para favorecer a aproximação entre os saberes tradicionais e o conhecimento acadêmico para então...
Tipo: Capítulo em livro técnico (INFOTECA-E) Palavras-chave: Percepção ambiental; Biodiversidade.
Ano: 2019 URL: http://www.infoteca.cnptia.embrapa.br/infoteca/handle/doc/1109488
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A literature review as an aid to identify strategies for mitigating ostreid herpesvirus 1 in Crassostrea gigas hatchery and nursery systems ArchiMer
Rodgers, Chris; Arzul, Isabelle; Carrasco, Noèlia; Furones Nozal, Dolores.
An understanding of husbandry strategies and any associated risk factors is important for designing management control measures that can reduce mortality in Pacific oysters, Crassostrea gigas, caused by ostreid  herpesvirus 1 (OsHV-1). The type of culture facility can be considered in relation to the potential pathways that could lead to the entry of a pathogen and its survival. In addition, the animal host (e.g. age, physiological state,  selective breeding programmes), husbandry procedures (e.g. stocking density), the pathogen itself (e.g. pathogenicity, virulence) and environmental effects (e.g. temperature) represent other relevant interconnected factors. However, all these factors provide valuable background information for outlining the mitigation...
Tipo: Text Palavras-chave: Crassostrea gigas; Husbandry; Management strategies; Ostreid herpesvirus 1; Oyster herpesvirus; Risk factors.
Ano: 2019 URL: https://archimer.ifremer.fr/doc/00474/58581/61146.pdf
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A literature review of the pollination strategies and breeding systems in Oncidiinae orchids Acta Botanica
Castro,Jonas B.; Singer,Rodrigo B..
ABSTRACT Oncidiinae is an exclusively Neotropical orchid subtribe with about 1600 described species and an impressive array of vegetative and floral morphological adaptations. We present the results of a literature survey on the pollination strategies and breeding systems of this orchid subtribe. The flowers are pollinated by a wide range of insects (mostly bees) and, sometimes, hummingbirds. Several genera reward their pollinators with floral resources such as oils, nectar or perfumes. Whereas pollination by oil-gathering bees likely evolved several times within Oncidiinae, exclusive pollination by perfume-gathering male Euglossine bees is likely restricted to a set of closely-related genera. Pollination by food or sexual deception is also present within...
Tipo: Info:eu-repo/semantics/article Palavras-chave: Breeding systems; Deception; Elaiophores; Fruiting success; Nectaries; Oncidiinae; Orchids; Osmophores; Pollination strategies.
Ano: 2019 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0102-33062019000400618
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A long-term field experiment demonstrates the influence of tillage on the bacterial potential to produce soil structure-stabilizing agents such as exopolysaccharides and lipopolysaccharides Organic Eprints
Cania, Barbara; Vestergaard, Gisle; Krauss, Maike; Fliessbach, Andreas; Schloter, Michael; Schulz, Stefanie.
Background: Stable soil aggregates are essential for optimal crop growth and preventing soil erosion. However, tillage is often used in agriculture to loosen the soil, which disrupts the integrity of these aggregates. Soil aggregation can be enhanced by bacteria through their ability to produce exopolysaccharides and lipopolysaccharides. These compounds stabilize soil aggregates by “gluing” soil particles together. However, it has yet to be shown how tillage influences the bacterial potential to produce aggregate-stabilizing agents. Therefore, we sampled conventional and reduced tillage treatments at 0–10 cm, 10–20 cm and 20–50 cm from a long-term field trial in Frick, Switzerland. We compared the stable aggregate fraction of the soil and the bacterial...
Tipo: Journal paper Palavras-chave: Soil quality; Soil biology; Biodiversity and ecosystem services.
Ano: 2019 URL: http://orgprints.org/35214/1/Cania_EnvMic_2019.pdf
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A low-protein, high carbohydrate diet induces increase in serum adiponectin and preserves glucose homeostasis in rats Anais da ABC (AABC)
CEOLIN,PATRÍCIA; FRANÇA,SUÉLEM A. DE; FROELICH,MENDALLI; SANTOS,MAÍSA P. DOS; PEREIRA,MAYARA P.; QUEIROZ,THAÍS S.; SILVA,FLÁVIA H.S. DA; LISBOA,PATRÍCIA C.; ANDRADE,CLAUDIA M.B.; BAVIERA,AMANDA M.; KAWASHITA,NAIR H..
Abstract: The aim of this study was investigate the effects of a low-protein, high-carbohydrate (LPHC) diet introduced to rats soon after weaning. The animals were distributed in the following groups: LPHC45: fed an LPHC diet (6%-protein, 74%-carbohydrate) for 45 days; C45: fed a control (C) diet (17%-protein, 63%-carbohydrate) for 45 days; R (Reverse): fed with LPHC for 15 days followed by C diet for 30 days. The LPHC45 group showed alterations in the energetic balance with an increase in brown adipose tissue, and in glucose tolerance, and lower final body weight, muscle mass and total protein in blood when compared with C45 group. The HOMA-IR index was similar between LPHC45 and C45 groups, but this parameter was lower in LPHC45 compared with R groups....
Tipo: Info:eu-repo/semantics/article Palavras-chave: Low-protein; High-carbohydrate diet; Post-weaning period; HOMA-IR; Adiponectin.
Ano: 2019 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0001-37652019000300714
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A lung image reconstruction from computed radiography images as a tool to tuberculosis treatment control J. Venom. Anim. Toxins incl. Trop. Dis.
Oliveira,Marcela de; Duarte,Sergio Barbosa; Giacomini,Guilherme; Pereira,Paulo Câmara Marques; Souza,Lenice do Rosário de; Miranda,José Ricardo de Arruda; Pina,Diana Rodrigues de.
Abstract Background: Background: Tuberculosis (TB) is an infectious lung disease with high worldwide incidence that severely compromises the quality of life in affected individuals. Clinical tests are currently employed to monitor pulmonary status and treatment progression. The present study aimed to apply a three-dimensional (3D) reconstruction method based on chest radiography to quantify lung-involvement volume of TB acute-phase patients before and after treatment. In addition, these results were compared with indices from conventional clinical exams to show the coincidence level. Methods: A 3D lung reconstruction method using patient chest radiography was applied to quantify lung-involvement volume using retrospective examinations of 50 patients who...
Tipo: Info:eu-repo/semantics/article Palavras-chave: Tuberculosis; Quantification; Lung involvement; Serum tests; Pulmonary function tests.
Ano: 2019 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1678-91992019000100302
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A machine learning algorithm for high throughput identification of FTIR spectra: Application on microplastics collected in the Mediterranean Sea ArchiMer
Kedzierski, Mikaël; Falcou-préfol, Mathilde; Kerros, Marie Emmanuelle; Henry, Maryvonne; Pedrotti, Maria Luiza; Bruzaud, Stéphane.
The development of methods to automatically determine the chemical nature of microplastics by FTIR-ATR spectra is an important challenge. A machine learning method, named k-nearest neighbors classification, has been applied on spectra of microplastics collected during Tara Expedition in the Mediterranean Sea (2014). To realize these tests, a learning database composed of 969 microplastic spectra has been created. Results show that the machine learning process is very efficient to identify spectra of classical polymers such as poly(ethylene), but also that the learning database must be enhanced with less common microplastic spectra. Finally, this method has been applied on more than 4000 spectra of unidentified microplastics. The verification protocol...
Tipo: Text Palavras-chave: Microplastic; Tara mediterranean campaign; FTIR spectra; Machine learning; K-nearest neighbor classification.
Ano: 2019 URL: https://archimer.ifremer.fr/doc/00501/61247/64825.pdf
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A mata ripária influencia a composição e estrutura da comunidade zooplanctônica de poças temporárias? Iheringia, Sér. Zool.
Medeiros,Íttalo L. S.; Santos,Felipe A. dos; El-Deir,Ana C. A.; Melo Júnior,Mauro de.
RESUMO Poças temporárias são importantes ampliadores da biodiversidade local, sobretudo em áreas florestadas estacionais. Alterações na cobertura vegetal ao longo das margens desses corpos hídricos podem alterar a composição e estrutura da sua comunidade zooplanctônica. Nesse sentindo, testamos a hipótese de que a presença de mata ripária altera a estrutura da comunidade zooplanctônica encontrada em poças temporárias. Foram filtrados até 10 litros de água, em malha de 20 µm, em poças com (CM) e sem mata ripária (SM), e coletados dados de clorofila-α e as variáveis limnológicas. Todos os espécimes foram identificados com microscópio óptico em câmara de Sedgewick-Rafter. Os dados foram tratados quanto à composição e estrutura da comunidade (riqueza,...
Tipo: Info:eu-repo/semantics/article Palavras-chave: Zooplâncton; Espécies indicadoras; Variáveis abióticas; Clorofila-α.
Ano: 2019 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0073-47212019000100237
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A MEASUREMENT SYSTEM BASED ON LiDAR TECHNOLOGY TO CHARACTERIZE THE CANOPY OF SUGARCANE PLANTS REA
Canata,Tatiana F.; Molin,José P.; Sousa,Rafael V. de.
ABSTRACT Laser sensor applications associated with LiDAR (Light Detection and Ranging) technology on platforms allow the evaluation of crop and forest biomass in a non-invasive way. This study presents the development of a measurement system based on LiDAR technology aimed at the proposed assessment of the height of sugarcane plants during the pre-harvest period. A laser sensor, a GNSS (Global Navigation Satellite System) receiver, and an inertial unit compose the measurement system. The equipment was integrated with a computer for data acquisition and installed on an agricultural tractor platform. The GNSS receiver with a real-time kinematic signal was synchronized to the laser sensor to obtain the point cloud and to the inertial unit to evaluate the...
Tipo: Info:eu-repo/semantics/article Palavras-chave: Canopy geometry; Instrumentation; Laser sensor; Remote sensing.
Ano: 2019 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0100-69162019000200240
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A meta-analysis of ABCG2 gene polymorphism and non-small cell lung cancer outcomes Genet. Mol. Biol.
Fu,Lei; Wang,Rong; Yin,Ling; Shang,Xiaopu; Zhang,Runtong; Zhang,Pengjun.
Abstract We aimed to analyze the correlation between ABCG2 gene polymorphisms of 34 GG/(GA + AA) loci, 421 CC/(AC + AA) loci, and non-small cell lung cancer (NSCLC) therapeutic effects via meta-analysis. With key words, the databases PubMed and EMBASE were searched for clinical studies on ABCG2 polymorphism and NSCLC. RR and 95% CIs were used to compute combined effects, followed by heterogeneity testing. Publication bias was examined using the funnel plot method. Review Manager 5.3 software was used for the meta-analysis. Ten studies were included. No evidence of heterogeneity exists in these studies. The results indicate that two polymorphic loci of ABCG2 gene (34 G>A, and 421 C>A) had no relationship with the curative effect of chemotherapy for...
Tipo: Info:eu-repo/semantics/article Palavras-chave: ABCG2; Polymorphism; Non-small cell lung cancer; Chemotherapy; Meta-analysis.
Ano: 2019 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572019000500105
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A meta‐analysis of fish behavioural reaction to underwater human presence ArchiMer
Samia, Diogo S. M.; Bessa, Eduardo; Blumstein, Daniel T.; Nunes, José A. C. C.; Azzurro, Ernesto; Morroni, Lorenzo; Sbragaglia, Valerio; Januchowski‐hartley, Fraser A.; Geffroy, Benjamin.
In an increasingly anthropic world, humans have profound impacts on the distribution and behaviour of marine fishes. The increased human presence has modified fishesf antipredator behavioural responses, and consequently flight decisions, as a function of their changed perceptions of risk. Understanding how fish react to human presence can help identify the most vulnerable functional groups/species and estimate impacts caused by human disturbance. Shoal and body size are known to influence fish flight initiation distance (FID; the distance between the predator and prey when the prey begins to escape); however, few studies attempt to test the moderators of these relationships. Here, we present a comprehensive meta]analysis evaluating FID of fish in...
Tipo: Text Palavras-chave: Antipredator behaviour; Economic escape theory; Fish size; Flight initiation distance; Shoal size.
Ano: 2019 URL: https://archimer.ifremer.fr/doc/00500/61173/64775.pdf
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A Meta-Analysis of the Impact of Foliar Feeding of Micronutrients on Productivity and Revenue Generation of Forage Crops Planta Daninha
IQBAL,M.A.; ABDUL,H.; MUZAMMIL,H.S.; IMTIAZ,H.; TANVEER,A.; SAIRA,I.; ANSER,A..
ABSTRACT: Food security assurance to meet the demands of increased population growth requires a proportional increase in milk and meat production which, in turn, depends on animal nutrition. Assessing foliar application of micronutrients for production of substantive quantities of good quality forage must be a goal of modern, profit-oriented, sustainable agriculture and plants with better competitive ability as compared to weeds. This meta-analysis made a quantitative and qualitative analysis of the impact of foliar feeding of micronutrients (iron, zinc, copper, sulfur and boron) on forage crops under varying pedo-climatic conditions. Weighted and unweighted meta-analyses were performed on 139 studies to evaluate 19 independent variables (9 qualitative, 5...
Tipo: Info:eu-repo/semantics/article Palavras-chave: Economic returns; Plant nutrition; Sprays; Weighted meta-analysis; Zinc.
Ano: 2019 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0100-83582019000100245
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A methodology based on data filtering to identify reference fleets to account for the abundance of fish species: Application to the Striped red mullet (Mullus surmulletus) in the Bay of Biscay ArchiMer
Caill-milly, Nathalie; Lissardy, Muriel; Bru, Noëlle; Dutertre, Marie-adèle; Saguet, Cassandre.
For data-limited stocks (DLS), professional fishing data can be used as a potential source of information, especially in the absence of appropriate scientific survey, to understand abundance evolution under realistic hypothesis on resource catchability. This work focuses on a data-filtering approach, the selected fishing effort must reflect vessel activity that is least dependent on their technical characteristics and as stable as possible over time. The variable of interest is landing by fishing sequence (landing for a given gear, gear mesh, day and ICES statistical rectangle) called LPUE. In order to account for the abundance of the species, it was necessary to consider the discards. The method thus proceeds in 4 steps: (i) focus on LPUE variability and...
Tipo: Text Palavras-chave: Data-limited stock; Commercial data; Discards; LPUE; Professional knowledge; Data filtering.
Ano: 2019 URL: https://archimer.ifremer.fr/doc/00503/61495/65305.pdf
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A methodology to determine size and shape of plots for sugarcane plantation Scientia Agricola
Cherri,Adriana Cristina; Vianna,Andrea Carla Gonçalves; Ramos,Rômulo Pimentel; Florentino,Helenice de Oliveira.
ABSTRACT: Brazil is the largest sugarcane producer in the world and the leader in the production of sugar and ethanol. Although sugarcane has become an important factor in the Brazilian economy, cultivation has presented many issues, for example, the problems due to burning before the manual harvest. The Brazilian authorities have approved a law that prohibits this practice and mechanized harvesting has thus become the most fitting approach. Given this development, areas for sugarcane plantation must be properly rebuilt to accommodate the new way of harvesting. The main characteristic demanded of sugarcane plots to use harvesting machines is that they must be rectangular. In the present paper, we propose a methodology for dividing the plantation area into...
Tipo: Info:eu-repo/semantics/article Palavras-chave: Planting planning; Sugarcane culture; Mechanized harvesting; AND/OR graph approach.
Ano: 2019 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0103-90162019001400266
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A mixed model applied to joint analysis in experiments with coffee blends using the least squares method Rev. Ciênc. Agron.
Paulino,Allana Lívia Beserra; Cirillo,Marcelo Angelo; Ribeiro,Diego Egídio; Borém,Flávio Meira; Matias,Gabriel Carvalho.
ABSTRACT The aim of the present study was to propose a mixed model for a sensory analysis of four experiments with blends of different standards of quality, including the species Coffea Arabica L. and Coffea Canephora. Each experiment differed in the proportions used to formulate the blends and the concentrations used in preparing the beverages, these being 7% and 10% coffee powder for each 100 ml of water. The response variables under analysis were the sensory characteristics of the beverage found in an assessment made by a group of trained tasters, considering taste, bitterness and a final score. Each description followed a numerical rating scale of intensity that ranged from 0 to 10. The model was implemented using the least squares method; this led to...
Tipo: Info:eu-repo/semantics/article Palavras-chave: Processing; Quality; Arabica; Conillon.
Ano: 2019 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1806-66902019000300345
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A multiproxy study of past environmental changes in the Sea of Okhotsk during the last 1.5 Ma ArchiMer
Lattaud, Julie; Lo, Li; Zeeden, Christian; Liu, Ya-jun; Song, Sheng-rong; Van Der Meer, Marcel T.j.; Sinninghe Damsté, Jaap S.; Schouten, Stefan.
Long-chain diols have been detected in a wide range of environments and have been used to reconstruct past environmental changes, however only a few long-term records exist to date. Here we reconstructed past environmental changes in the central Sea of Okhotsk over the last 1.5 million years, covering the Mid-Pleistocene Transition (MPT). Sea surface temperatures (SST) reconstructed using the Long-Chain Diol Index (LDI) reflects glacial/interglacial changes. However, when compared with other organic paleothermometers (Uk’37 and TEXL86) the LDI-SST is lower during interglacials and similar or higher during glacials, possibly suggesting a shift of diol production season during interglacials. The LDI-SST does not change in periodicity around the MPT as...
Tipo: Text Palavras-chave: Sea of Okhotsk; Mid-Pleistocene Transition; LDI; TEX86; U-37(K)'; Biogenic opal; Long-chain diols.
Ano: 2019 URL: https://archimer.ifremer.fr/doc/00489/60060/63342.pdf
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A Mussel's Life Around Deep-Sea Hydrothermal Vents ArchiMer
Duperron, Sebastien; Gaudron, Sylvie M.; Laming, Sven.
Hydrothermal vents are places where seawater exits cracks in the sea floor, having been super-heated and enriched with metals and minerals deep in the underlying bedrock. They are an example of an ecosystem based on chemosynthesis, where life is sustained by energy from chemicals rather than energy from sunlight. The discovery of an abundance of life around deep-sea hydrothermal vents emitting hot and toxic fluids demonstrated that animals and other organisms could thrive in the dark, cold and high-pressure deep oceans. Mussels are among the most studied animals found near hydrothermal vents. Scientists discovered that mussels rely on a close, living relationship—a “symbiosis”—with bacteria for their nutrition. In this symbiosis, bacteria use chemicals...
Tipo: Text
Ano: 2019 URL: https://archimer.ifremer.fr/doc/00500/61188/64718.pdf
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A new and improved electric fish finder with resources for printed circuit board fabrication Neotropical Ichthyology
Haag,Michael A.; Lambert,Jeffrey C.; Waddell,Joseph C.; Crampton,William G.R..
ABSTRACT We describe the circuit design, construction, and operation of a field-portable electric fish finder (an AC-coupled wide-band differential bio-amplifier with loudspeaker output). This device permits detection and monitoring of the electric organ discharges generated by neotropical gymnotiform fishes (as well as the mormyroid fishes of tropical Africa). Our design is modified from earlier versions to optimize detection performance and stability over a wider range of ambient water conductivity, including under conditions of extremely low conductivity (< ca. 10 μScm-1). Our new electric fish finder design also incorporates complete waterproofing and longer battery autonomy. We provide Gerber and Eagle files made with the electronic design...
Tipo: Info:eu-repo/semantics/article Palavras-chave: Bio-amplifier; Electric organ discharge; Electroreception; Gymnotiformes; Mormyridae.
Ano: 2019 URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1679-62252019000500206
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A new approach to agriculture is emerging in the world's tropical belt. Infoteca-e
LOPES, M. A..
Options Summer 2019: Embrapa visiting scholar Mauricio Antonio Lopes writes about how policies informed by science are contributing to advances in Brazil?s agricultural sector.
Tipo: Artigo de divulgação na mídia (INFOTECA-E) Palavras-chave: Setor agrícola brasileira; Embrapa; Políticas Públicas; Uso da Terra; Agricultura Sustentável; Setor Agrícola; Public policy; Land use; Sustainable agriculture.
Ano: 2019 URL: http://www.infoteca.cnptia.embrapa.br/infoteca/handle/doc/1123784
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